Web Access Research Portal

Researcher: Burke, CM (Dr Chris Burke)

Research Fields

Aquaculture
Marine and Estuarine Ecology (incl. Marine Ichthyology)
Freshwater Ecology
Microbiology
Microbial Ecology
Physiology
Animal Growth and Development
Fisheries Sciences
Science, Technology and Engineering Curriculum and Pedagogy
Phycology (incl. Marine Grasses)
Bacteriology
Zoology
Curriculum and Pedagogy Theory and Development
Environment Policy
Photogrammetry and Remote Sensing
Infectious Agents
Immunological and Bioassay Methods
Curriculum and Pedagogy
Fish Pests and Diseases
Physical Geography and Environmental Geoscience
Crop and Pasture Nutrition
Aquatic Ecosystem Studies and Stock Assessment
Food Packaging, Preservation and Safety
Veterinary Immunology
Environmental Management
Environmental Impact Assessment
Physical Oceanography
Environmental Monitoring
Analytical Biochemistry
Protein Trafficking
Population, Ecological and Evolutionary Genetics
Soil Chemistry (excl. Carbon Sequestration Science)

Research Impact

Fisheries - Aquaculture
Ecosystem Assessment and Management of Coastal and Estuarine Environments
Environment
Ecosystem Assessment and Management of Marine Environments
Animal Production and Animal Primary Products
Natural Hazards in Marine Environments
Marine Flora, Fauna and Biodiversity
Coastal and Estuarine Water Management
Fisheries - Wild Caught
Processed Food Products and Beverages (excl. Dairy Products)
Aquaculture Crustaceans (excl. Rock Lobster and Prawns)
Aquaculture Rock Lobster
Expanding Knowledge in the Environmental Sciences
Teacher and Instructor Development
Syllabus and Curriculum Development
Aquaculture Fin Fish (excl. Tuna)
Food Safety
Pedagogy
Learner and Learning Processes
Ecosystem Assessment and Management of Antarctic and Sub-Antarctic Environments
Physical and Chemical Conditions of Water in Coastal and Estuarine Environments
Antarctic and Sub-Antarctic Flora, Fauna and Biodiversity
Flora, Fauna and Biodiversity of environments
Expanding Knowledge in Philosophy and Religious Studies
Native Forests

Career Best Publications

Bacterial decontamination of on-grown Artemia; Aquaculture
Bacterial diversity in organically-enriched fish farm sediments; FEMS Microbiology Ecology
Biofouling of fish-cage netting: the efficacy of a silicone coating and the effect of netting colour; Aquaculture
Molecular diffusive fluxes of oxygen in sediments of Port Phillip Bay in south-eastern Australia; Marine and Freshwater Research

Research Publications

A preliminary investigation into epibiont fouling on phyllosoma larvae of the southern rock lobster, Jasus edwardsii, and its control; 7th International Conference and Workshop on Lobster Biology and Management
A preliminary investigation into epibiont fouling on phyllosoma larvae of the southern rock lobster, Jasus Edwardsii, and its control; 7th International Conference and Workshop on Lobster Biology and Management
A series of MATLAB learning modules to enhance numerical competency in applied marine sciences; American Geophysical Union Fall Meeting
Ammonia-oxidiser communities in fish farm sediments; Micro NZ 2003
Application of electrolysed oxidising water as a sanitiser to extend the shelf-life of seafood products: a review; Journal of Food Science and Technology
Authentic inquiry in microbiology education: connecting our research practice to our pedagogy; Australian Society for Microbiology Annual Scientific Meeting
Bacterial Colonization of a Formulated Abalone Diet During Extended Immersion; Journal of Shellfish Research
Bacterial community shifts in organically perturbed sediments; Environmental Microbiology
Bacterial decontamination of Artemia; MicroNZ 2003
Bacterial decontamination of on-grown Artemia; Aquaculture
Bacterial diversity in organically-enriched fish farm sediments; FEMS Microbiology Ecology
Benthic microbial production of oxygen supersaturates the bottom water of a stratified hypersaline lake; Microbial Ecology
Biofouling of fish-cage netting: Efficacy and problems of in situ cleaning; Aquaculture
Biofouling of fish-cage netting: the efficacy of a silicone coating and the effect of netting colour; Aquaculture
Can experiment scale abalone growout tanks also function as community respirometers?; World Aquaculture 99
Characterization of the Digestive Tract of Greenlip Abalone, Haliotis Laevigata Donovan.I. Morphology and Histology; Journal of Shellfish Research
Characterization of the digestive tract of greenlip abalone, Haliotis laevigata Donovan. II. Microenvironment and bacterial flora; Journal of Shellfish Research
Comparison of Total Immunoglobulin, complement and lysozyme concentrations in different groups of Southern Bluefin tuna (Thunnus maccoyii); Developmental and Comparative Immunology
Development of novel methods for the assessment of sediment condition and determination of management protocols for sustainable finfish cage aquaculture operations
Development of novel methods for the assessment of sediment condition and determination of management protocols for sustainable finfish cage aquaculture operations; ASAS Conference
Development of novel methods for the assessment of sediment condition and determination of management protocols for sustainable finfish cage aquaculture operations: An update on research progress; ASAS Conference
Distribution, variation, and phylogeny of saxitoxin biosynthesis genes in the dinoflagellate genus Gymnodium; 10th International Phycological Congress
Effect of oxygen supersaturation and temperature on juvenile greenlip, Haliotis laevigata, and blacklip, Haliotis rubra, abalone; Fourth International Abalone Symposium: Biology, Culture, Fisheries
Effects of Combined Exposure to Elevated Ammonia and Low Dissolved Oxygen Levels in Greenlip (Haliotis Laevigata Donovan) and Blacklip (H. Rubra Leach) Abalone. 1. Growth and Mortality Data From Simulated Systems Failure; Journal of Shellfish Research
Effects of organic perturbation on marine sediment betaproteobacterial ammonia oxidizers and on benthic nitrogen biogeochemistry; Marine Ecology Progress Series
Effects of oxygen supersaturation and temperature on juvenile greenlip, Haliotis laevigata Donovan, and blacklip, Haliotis rubra Leach, abalone; Aquaculture Research
Environmental Requirments of Abalone
Exploring the dynamic relationship between water quality, stocking density and refuge provision for greenlip abalone (Haliotis laevigata); World Aquaculture 99
Exploring the dynamic relationship between water quality, stocking density and refuge provision for greenlip abalone (Haliotis laevigata)
Flavobacterial response to organic pollution; Aquatic Microbiology Ecology
Growth reductions in greenlip (Haliotis laevigata) and blacklip (Haliotis rubra) abalone resulting form chronic exposure to sublethal combinations of elevated ammonia and low dissolved oxygen levels; Fourth International Abalone Symposium: Biology, Culture, Fisheries
Homeostatic interactions between the benthic microbial communities and the waters of a hypersaline lake, Lake Hayward, western Australia; Marine and Freshwater Research
Immune responses of teleost fish; Australian Veterinary Journal
Impact on Coastal Sediment Microbial Communities by Intense Short Term Eutrophication; Microbes in a Changing World
In situ quantification of fish‐cage fouling by underwater photography and image analysis; Biofouling
In vitro screening of lactic acid bacteria isolated from gastrointestinal tract of Atlantic salmon (Salmo salar) as probiont candidates; Aquaculture International
Investigation of humoral immune factors from selected groups of southern bluefin tuna, Thunnus maccoyii (Castelnau): implications for aquaculture; Journal of Fish Diseases
Is the need for refuges in abalone culture dependent on stocking density for greenlip abalone?
Is the salinity of Lake Clifton (Yalgorup National Park) increasing?; Journal of the Royal Society of Western Australia
Isolation and partial characterisation of immunoglobulin from southern bluefin tuna Thunnus maccoyii Castelnau; Fish & Shellfish Immunology
Microbial Ecology of Fish Farm Sediments; Aquafin CRC Conference
Microbial Ecology of Fish Farm Sediments; Australian Society of Microbiology Conference
Microbial Oceans: a Review of Recent Advances in our understanding of Marine Biochemical Cycling; Australian Society for Microbiology Annual Scientific Meeting
Microprofiles of oxygen in cores from Port Phillip Bay taken in January and February 1994
Modelling Growth of Listeria monoxytogenes in fish harvesting tanks
Molecular diffusive fluxes of oxygen in sediments of Port Phillip Bay in south-eastern Australia; Marine and Freshwater Research
One Thing Leads to Another: The Relationship Between Biology and Chemistry in Sediment Recovery; Aquafin CRC Conference
Ontogeny of immune system organs in northern bluefin tuna (Thunnus orientalis, Temminck and Schlegel 1844); Aquaculture Research
Peer Review of Teaching to Promote Learning Outcomes; Microbiology Australia
Probiotic and pathogenic bacterial isolates in the culture of Jasus edwardsii and Sagmariasus verreauxi phyllosoma; 8th International Conference and workshop on Lobster Biology and Management
Production, characterisation and diagnostic use of antisera to southern bluefin tuna (Thunnus maccoyii Castelnau) immunoglobulin; Aquaculture
Prospects of using marine actinobacteria as probiotics in aquaculture ; Applied Microbiology and Biotechnology
Quantitative detection of G. catenatum by qPCR based on the rDNA-ITS and sxtA4 genes; The 16th International Conference on Harmful Algae
Recovery and growth effects of anaesthetic and mechanical removal on greenlip (Haliotis laevigata) and blacklip (Haliotis rubra) abalone; Fourth International Abalone Symposium: Biology, Culture, Fisheries
Review of Shellfish Purification Technology Research and Development
Screening of marine Streptomyces spp. for potential use as probiotics in aquaculture; Aquaculture:
Seawater ozonation and formalin disinfection for the larval culture of eastern rock lobster, Jasus (Sagmariasus) verreauxi, phyllosoma; Aquaculture: An International Journal Devoted to Fundamental Aquatic Food Resources
Sediment condition associated with finfish cage aquaculture operations; ASAS Conference
Should it be Science or Should it be Microbiology? Teaching Aquaculture students how to practice science in microbiology; Australian Society for Microbiology Annual Scientific Meeting
Tasmanian Isolates of Streptococcus sp. biovar 1 and verified strains of lactococcus garvieae and enterococcus seriolicida compared by microbiological, molecular biological and 'in vivo' techniques; 5th Symposium on Diseases in Asian Aquaculture
Teaching Science in Microbiology: an inquiry-based learning approach; 16th Annual American Society for Microbiology Conference for Undergraduate Educators
Temporal changes in sedimentary microbial communities underlying salmon farms; Aquafest Conference
The Challenges of Teaching Microbiology; Microbiology Australia
The development of a fluorescent antibody stain to identify a Uronema sp. (Ciliophora:Scuticociliatida) implicated in fatal encephalitis in southern bluefin tuna (Thunnus Maccoyii); Bulletin of the European Association of Fish Pathologists
The morphology, abundance and composition of marine snow at sites adjacent to and away from a salmon falm; Annual Scientific Meeting of the Australian Society for Microbiology
The relative susceptibility of fish to infections by Flexibacter columnaris and Flexibacter maritimus; Aquaculture
Threshold learning outcomes for a microbiology major; Microbiology Australia
Toward an improved ecosystem based management approach: incorporating catchment characteristics into better management and planning of the Great Barrier Reef marine ecosystem; Journal of Environmental Planning and Management

Research Projects

Abalone Aquaculture Subprogram - Manufactures diet development; Fisheries Research & Development Corporation (FRDC)
Characterising the benthic diffusive boundary layer.; University of Tasmania (UTAS)
Development of Novel Methods for the Assessment of Sediment Condition and Determination of Management Protocols for Sustainable Finfish Cage Aquaculture Operations; Fisheries Research & Development Corporation (FRDC)
Effects of elevated UV radiation on the productivity of sea ice algae; Australian Research Council (ARC)
Environmental requirements of abalone; Fisheries Research & Development Corporation (FRDC)
Quality and safety assurance in marine finfish products - a pilot project; Fisheries Research & Development Corporation (FRDC)

Research Candidate Supervision

Alternatives to Fish Oil Substitution - An Assessment of Strategies for Sustaining n-3 Long Chain Polyunsaturated Fatty Acids (n-3 LC-PUFA) Levels in Salmonids
Aspects of the Interaction between the Marine Bacterium Alcanivorax DG881 and the Toxic Dinoflagellate Gymnodinium catenatum
Benthic Respiration and Nutrient Cycling in the Huon Estuary (Southern Tasmania)
Biofouling of salmon-cage netting at Dover, Tasmania- Colonisation and effectiveness of non-biocidal antifoulants
Comparison of the pathogenicity and physiology of seven members of the Cytophaga/Flexibacter group
Development and Application of a Best Practice Supply Chain Model to 4 Species of Australian Seafood to Define Maximum Microbial and Quality Shelflife
Experimental Models of Bacteria-Phytoplankton Interactions and Bacterial Influence on Growth of Toxic Dinoflagellate, Gymnodinium catenatum
Factors Influencing Growth and Water Quality in Experimental Abalone Culture Systems
Factors influencing the Reproductive Development and Early Life History of Blacklip (Haliotis rubra) and Greenlip (H. Laevigata) Abalone
Immunology of Southern Bluefin Tuna
Microbial Control in Larval Southern Rock Lobster (Jasus edwardsii) and Artemia
Microbial Ecology of Aquaculture Sediments
Microbiological and histological studies on Streptococcus sp biovar 1 in infected fish and the environment
Potential biological control of aflatoxins in dried fish
Probiotic and Pathogenic Bacteria in Larval Rearing of Spiny Lobsters, Jasus edwardsii and Jasus (Sagmariasus) verreauxi
Screenin and Characterization of Lactic Acid Bacteria (LAB) in Gastrointestinal Tract of Barramundi, Abalone and Lobster as Probiotic Candidates
Variation and Inheritance of Toxin Production in the Dinolagellate Gymnodinium Catenatum